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Scientific data 122건

  1. [해외논문]   MycoDB, a global database of plant response to mycorrhizal fungi  

    Chaudhary, V. Bala (Department of Environmental Science and Studies, DePaul University , Chicago, Illinois 60614, USA ) , Rú (National Institute for Mathematical and Biological Synthesis, University of Tennessee , Knoxville, Tennessee 37996-3410, USA ) , a, Megan A. (School of Forestry, Northern Arizona University , Flagstaff, Arizona 86011, USA ) , Antoninka, Anita (Department of Ecology and Evolutionary Biology, University of Kansas , Lawrence, Kansas 66045, USA ) , Bever, James D. (Colorado Forest Restoration Institute, Colorado State University , Fort Collins, Colorado 80523-1472, USA ) , Cannon, Jeffery (Department of Biological Sciences, Northern Arizona University , Flagstaff, Arizona 86011, USA ) , Craig, Ashley (Department of Biology, Indiana University , Bloomington, Indiana 47405, USA ) , Duchicela, Jessica (US Environmental Protection Agency, Office of Solid Waste and Emergency Response , Washington DC 20004, USA ) , Frame, Alicia (Unive) , Gardes, Monique , Gehring, Catherine , Ha, Michelle , Hart, Miranda , Hopkins, Jacob , Ji, Baoming , Johnson, Nancy Collins , Kaonongbua, Wittaya , Karst, Justine , Koide, Roger T. , Lamit, Louis J. , Meadow, James , Milligan, Brook G. , Moore, John C. , Pendergast IV, Thomas H. , Piculell, Bridget , Ramsby, Blake , Simard, Suzanne , Shrestha, Shubha , Umbanhowar, James , Viechtbauer, Wolfgang , Walters, Lawrence , Wilson, Gail W. T. , Zee, Peter C. , Hoeksema, Jason D.
    Scientific data v.3 ,pp. 160028 , 2016 ,

    초록

    Plants form belowground associations with mycorrhizal fungi in one of the most common symbioses on Earth. However, few large-scale generalizations exist for the structure and function of mycorrhizal symbioses, as the nature of this relationship varies from mutualistic to parasitic and is largely context-dependent. We announce the public release of MycoDB, a database of 4,010 studies (from 438 unique publications) to aid in multi-factor meta-analyses elucidating the ecological and evolutionary context in which mycorrhizal fungi alter plant productivity. Over 10 years with nearly 80 collaborators, we compiled data on the response of plant biomass to mycorrhizal fungal inoculation, including meta-analysis metrics and 24 additional explanatory variables that describe the biotic and abiotic context of each study. We also include phylogenetic trees for all plants and fungi in the database. To our knowledge, MycoDB is the largest ecological meta-analysis database. We aim to share these data to highlight significant gaps in mycorrhizal research and encourage synthesis to explore the ecological and evolutionary generalities that govern mycorrhizal functioning in ecosystems.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

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  2. [해외논문]   SCSPOD14, a South China Sea physical oceanographic dataset derived from in situ measurements during 1919–2014  

    Zeng, Lili (State Key Laboratory of Tropical Oceanography, South China Sea Institute of Oceanology, Chinese Academy of Sciences , Guangzhou 510301, China ) , Wang, Dongxiao (State Key Laboratory of Tropical Oceanography, South China Sea Institute of Oceanology, Chinese Academy of Sciences , Guangzhou 510301, China ) , Chen, Ju (State Key Laboratory of Tropical Oceanography, South China Sea Institute of Oceanology, Chinese Academy of Sciences , Guangzhou 510301, China ) , Wang, Weiqiang (State Key Laboratory of Tropical Oceanography, South China Sea Institute of Oceanology, Chinese Academy of Sciences , Guangzhou 510301, China ) , Chen, Rongyu (State Key Laboratory of Tropical Oceanography, South China Sea Institute of Oceanology, Chinese Academy of Sciences , Guangzhou 510301, China )
    Scientific data v.3 ,pp. 160029 , 2016 ,

    초록

    In addition to the oceanographic data available for the South China Sea (SCS) from the World Ocean Database (WOD) and Array for Real-time Geostrophic Oceanography (Argo) floats, a suite of observations has been made by the South China Sea Institute of Oceanology (SCSIO) starting from the 1970s. Here, we assemble a SCS Physical Oceanographic Dataset (SCSPOD14) based on 51,392 validated temperature and salinity profiles collected from these three datasets for the period 1919–2014. A gridded dataset of climatological monthly mean temperature, salinity, and mixed and isothermal layer depth derived from an objective analysis of profiles is also presented. Comparisons with the World Ocean Atlas (WOA) and IFREMER/LOS Mixed Layer Depth Climatology confirm the reliability of the new dataset. This unique dataset offers an invaluable baseline perspective on the thermodynamic processes, spatial and temporal variability of water masses, and basin-scale and mesoscale oceanic structures in the SCS. We anticipate improvements and regular updates to this product as more observations become available from existing and future in situ networks.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  3. [해외논문]   Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors  

    Orsini, Luisa (Environmental Genomics Group, School of Biosciences, University of Birmingham , Birmingham B15 2TT, UK ) , Gilbert, Donald (Biology Department, Indiana University , 1001 E. Third Street, Bloomington, Indiana 47405, USA ) , Podicheti, Ram (School of Informatics and Computing, Indiana University , 919 E. Tenth Street, Bloomington, Indiana 47408, USA ) , Jansen, Mieke (Laboratory of Aquatic Ecology, Evolution and Conservation, University of Leuven , Ch. Deberiotstraat 32, Leuven 3000, Belgium ) , Brown, James B. (Department of Genome Dynamics Lawrence Berkeley National Laboratory, University of California Berkeley , Berkeley, California 94720, USA ) , Solari, Omid Shams (Department of Genome Dynamics Lawrence Berkeley National Laboratory, University of California Berkeley , Berkeley, California 94720, USA ) , Spanier, Katina I. (Laboratory of Aquatic Ecology, Evolution and Conservation, University of Leuven , Ch. Deberiotstraat 32, Leuven 3000, Belgium <count) , Colbourne, John K. , Rush, Douglas , Decaestecker, Ellen , Asselman, Jana , De Schamphelaere, Karel A.C. , Ebert, Dieter , Haag, Christoph R. , Kvist, Jouni , Laforsch, Christian , Petrusek, Adam , Beckerman, Andrew P. , Little, Tom J. , Chaturvedi, Anurag , Pfrender, Michael E. , De Meester, Luc , Frilander, Mikko J.
    Scientific data v.3 ,pp. 160030 , 2016 ,

    초록

    The full exploration of gene-environment interactions requires model organisms with well-characterized ecological interactions in their natural environment, manipulability in the laboratory and genomic tools. The waterflea Daphnia magna is an established ecological and toxicological model species, central to the food webs of freshwater lentic habitats and sentinel for water quality. Its tractability and cyclic parthenogenetic life-cycle are ideal to investigate links between genes and the environment. Capitalizing on this unique model system, the STRESSFLEA consortium generated a comprehensive RNA-Seq data set by exposing two inbred genotypes of D. magna and a recombinant cross of these genotypes to a range of environmental perturbations. Gene models were constructed from the transcriptome data and mapped onto the draft genome of D. magna using EvidentialGene. The transcriptome data generated here, together with the available draft genome sequence of D. magna and a high-density genetic map will be a key asset for future investigations in environmental genomics.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  4. [해외논문]   Modeling angle-resolved photoemission of graphene and black phosphorus nano structures  

    Park, Sang Han (Beamline Division Group of PAL-XFEL Project Headquarters, Pohang university of science and technology , 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk 790-784, Korea ) , Kwon, Soonnam (Beamline Division Group of PAL-XFEL Project Headquarters, Pohang university of science and technology , 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk 790-784, Korea )
    Scientific data v.3 ,pp. 160031 , 2016 ,

    초록

    Angle-resolved photoemission spectroscopy (ARPES) data on electronic structure are difficult to interpret, because various factors such as atomic structure and experimental setup influence the quantum mechanical effects during the measurement. Therefore, we simulated ARPES of nano-sized molecules to corroborate the interpretation of experimental results. Applying the independent atomic-center approximation, we used density functional theory calculations and custom-made simulation code to compute photoelectron intensity in given experimental setups for every atomic orbital in poly-aromatic hydrocarbons of various size, and in a molecule of black phosphorus. The simulation results were validated by comparing them to experimental ARPES for highly-oriented pyrolytic graphite. This database provides the calculation method and every file used during the work flow.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  5. [해외논문]   Digital elevation model and orthophotographs of Greenland based on aerial photographs from 1978–1987  

    Korsgaard, Niels J. (Centre for GeoGenetics, Natural History Museum, University of Copenhagen , 1350 Copenhagen, Denmark ) , Nuth, Christopher (Department of Geosciences, University of Oslo , Oslo 0316, Norway ) , Khan, Shfaqat A. (DTU Space—National Space Institute, Technical University of Denmark, Department of Geodesy , 2800 Kgs. Lyngby, Denmark ) , Kjeldsen, Kristian K. (Centre for GeoGenetics, Natural History Museum, University of Copenhagen , 1350 Copenhagen, Denmark ) , Bjørk, Anders A. (Centre for GeoGenetics, Natural History Museum, University of Copenhagen , 1350 Copenhagen, Denmark ) , Schomacker, Anders (Centre for GeoGenetics, Natural History Museum, University of Copenhagen , 1350 Copenhagen, Denmark ) , Kjær, Kurt H. (Centre for GeoGenetics, Natural History Museum, University of Copenhagen , 1350 Copenhagen, Denmark )
    Scientific data v.3 ,pp. 160032 , 2016 ,

    초록

    Digital Elevation Models (DEMs) play a prominent role in glaciological studies for the mass balance of glaciers and ice sheets. By providing a time snapshot of glacier geometry, DEMs are crucial for most glacier evolution modelling studies, but are also important for cryospheric modelling in general. We present a historical medium-resolution DEM and orthophotographs that consistently cover the entire surroundings and margins of the Greenland Ice Sheet 1978–1987. About 3,500 aerial photographs of Greenland are combined with field surveyed geodetic ground control to produce a 25 m gridded DEM and a 2 m black-and-white digital orthophotograph. Supporting data consist of a reliability mask and a photo footprint coverage with recording dates. Through one internal and two external validation tests, this DEM shows an accuracy better than 10 m horizontally and 6 m vertically while the precision is better than 4 m. This dataset proved successful for topographical mapping and geodetic mass balance. Other uses include control and calibration of remotely sensed data such as imagery or InSAR velocity maps.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  6. [해외논문]   Let referees see the data  


    Scientific data v.3 ,pp. 160033 , 2016 ,

    초록

    Digital Elevation Models (DEMs) play a prominent role in glaciological studies for the mass balance of glaciers and ice sheets. By providing a time snapshot of glacier geometry, DEMs are crucial for most glacier evolution modelling studies, but are also important for cryospheric modelling in general. We present a historical medium-resolution DEM and orthophotographs that consistently cover the entire surroundings and margins of the Greenland Ice Sheet 1978–1987. About 3,500 aerial photographs of Greenland are combined with field surveyed geodetic ground control to produce a 25 m gridded DEM and a 2 m black-and-white digital orthophotograph. Supporting data consist of a reliability mask and a photo footprint coverage with recording dates. Through one internal and two external validation tests, this DEM shows an accuracy better than 10 m horizontally and 6 m vertically while the precision is better than 4 m. This dataset proved successful for topographical mapping and geodetic mass balance. Other uses include control and calibration of remotely sensed data such as imagery or InSAR velocity maps.

    원문보기

    원문보기
    무료다운로드 유료다운로드

    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  7. [해외논문]   Spatializing 6,000 years of global urbanization from 3700 BC to AD 2000  

    Reba, Meredith (Yale School of Forestry &Environmental Studies, Yale University, New Haven, Connecticut 06511, USA ) , Reitsma, Femke (Department of Geography, University of Canterbury, Christchurch 8020, New Zealand ) , Seto, Karen C. (Yale School of Forestry &Environmental Studies, Yale University, New Haven, Connecticut 06511, USA)
    Scientific data v.3 ,pp. 160034 , 2016 ,

    초록

    How were cities distributed globally in the past? How many people lived in these cities? How did cities influence their local and regional environments? In order to understand the current era of urbanization, we must understand long-term historical urbanization trends and patterns. However, to date there is no comprehensive record of spatially explicit, historic, city-level population data at the global scale. Here, we developed the first spatially explicit dataset of urban settlements from 3700 BC to AD 2000, by digitizing, transcribing, and geocoding historical, archaeological, and census-based urban population data previously published in tabular form by Chandler and Modelski. The dataset creation process also required data cleaning and harmonization procedures to make the data internally consistent. Additionally, we created a reliability ranking for each geocoded location to assess the geographic uncertainty of each data point. The dataset provides the first spatially explicit archive of the location and size of urban populations over the last 6,000 years and can contribute to an improved understanding of contemporary and historical urbanization trends.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  8. [해외논문]   MIMIC-III, a freely accessible critical care database  

    Johnson, Alistair E.W. (Laboratory for Computational Physiology, MIT Institute for Medical Engineering and Science, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, USA ) , Pollard, Tom J. (Laboratory for Computational Physiology, MIT Institute for Medical Engineering and Science, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, USA ) , Shen, Lu (Information Systems, Beth Israel Deaconess Medical Center , Boston, Massachusetts 02215, USA ) , Lehman, Li-wei H. (Laboratory for Computational Physiology, MIT Institute for Medical Engineering and Science, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, USA ) , Feng, Mengling (Laboratory for Computational Physiology, MIT Institute for Medical Engineering and Science, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, USA ) , Ghassemi, Mohammad (Laboratory for Computational Physiology, MIT Institute for Medical Engineering and Science, Massachusetts) , Moody, Benjamin , Szolovits, Peter , Anthony Celi, Leo , Mark, Roger G.
    Scientific data v.3 ,pp. 160035 , 2016 ,

    초록

    MIMIC-III ('Medical Information Mart for Intensive Care') is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. Data includes vital signs, medications, laboratory measurements, observations and notes charted by care providers, fluid balance, procedure codes, diagnostic codes, imaging reports, hospital length of stay, survival data, and more. The database supports applications including academic and industrial research, quality improvement initiatives, and higher education coursework.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  9. [해외논문]   High resolution, week-long, locomotion time series from Japanese quail in a home-box environment  

    Guzmá (Instituto de Investigaciones Biológicas y Tecnológicas (IIByT, CONICET), and Instituto de Ciencia y Tecnología de los Alimentos, Cátedra de Química Biológica, Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba , 1611 Vélez Sarsfield, X5016GCA, Córdoba, Argentina ) , n, Diego A. (Instituto de Investigaciones Biológicas y Tecnológicas (IIByT, CONICET), and Instituto de Ciencia y Tecnología de los Alimentos, Cátedra de Química Biológica, Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba , 1611 Vélez Sarsfield, X5016GCA, Córdoba, Argentina ) , Pellegrini, Stefania (Centro de Investigaciones y Estudios de Matemática (CIEM, CONICET), and Facultad de Matemática, Astronomía y Física FAMAF, Universidad Nacional de Córdoba, Ing. Medina All) , Flesia, Ana G. , Aon, Miguel A. , Marin, Raú , l H. , Kembro, Jackelyn M.
    Scientific data v.3 ,pp. 160036 , 2016 ,

    초록

    Temporal and spatial patterns of locomotion reflect both resting periods and the movement from one place to another to satisfy physiological and behavioural needs. Locomotion is studied in diverse areas of biology such as chronobiology and physiology, as well as in biomathematics. Herein, the locomotion of 24 visually-isolated Japanese quails in their home-box environment was recorded continuously over a 6.5 days at a 0.5 s sampling rate. Three time series are presented for each bird: (1) locomotor activity, (2) distance ambulated, and (3) zone of the box where the bird is located. These high resolution, week-long, time series consisting of 1.07×10 6 data points represent, to our knowledge, a unique data set in animal behavior, and are publically available on FigShare. The data obtained can be used for analyzing dynamic changes of daily or several day locomotion patterns, or for comparison with existing or future data sets or mathematical models across different taxa.

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    회원님의 원문열람 권한에 따라 열람이 불가능 할 수 있으며 권한이 없는 경우 해당 사이트의 정책에 따라 회원가입 및 유료구매가 필요할 수 있습니다.이동하는 사이트에서의 모든 정보이용은 NDSL과 무관합니다.

    NDSL에서는 해당 원문을 복사서비스하고 있습니다. 아래의 원문복사신청 또는 장바구니담기를 통하여 원문복사서비스 이용이 가능합니다.

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  10. [해외논문]   Electricity, water, and natural gas consumption of a residential house in Canada from 2012 to 2014  

    Makonin, Stephen (Engineering Science, Simon Fraser University , 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6 ) , Ellert, Bradley (Computing Science, Simon Fraser University , 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6 ) , Bajić (Engineering Science, Simon Fraser University , 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6 ) , , Ivan V. (Computing Science, Simon Fraser University , 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6 ) , Popowich, Fred
    Scientific data v.3 ,pp. 160037 , 2016 ,

    초록

    With the cost of consuming resources increasing (both economically and ecologically), homeowners need to find ways to curb consumption. The Almanac of Minutely Power dataset Version 2 (AMPds2) has been released to help computational sustainability researchers, power and energy engineers, building scientists and technologists, utility companies, and eco-feedback researchers test their models, systems, algorithms, or prototypes on real house data. In the vast majority of cases, real-world datasets lead to more accurate models and algorithms. AMPds2 is the first dataset to capture all three main types of consumption (electricity, water, and natural gas) over a long period of time (2 years) and provide 11 measurement characteristics for electricity. No other such datasets from Canada exist. Each meter has 730 days of captured data. We also include environmental and utility billing data for cost analysis. AMPds2 data has been pre-cleaned to provide for consistent and comparable accuracy results amongst different researchers and machine learning algorithms.

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